ModuleFinder Online Supplemental Materials

We developed a rigorous scoring scheme, implemented as a C program called ModuleFinder, that evaluates the likelihood that a given genomic region is a cis regulatory module for an input set of transcription factors according to its degree of: (1) homotypic site clustering; (2) heterotypic site clustering; and (3) evolutionary conservation across multiple genomes.



Questions or problems should be directed to aphilippakis[at] and mlbulyk[at]